USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P38159 USC-OGP 2-DE database:  P38159 P38159 General information about the entry View entry in simple text format Entry name RBMX_HUMAN Primary accession number P38159 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Glycoprotein p43; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G; Contains: RecName: Full=RNA-binding motif protein, X chromosome, N-terminally processed;. Gene name Name=RBMX Synonyms=HNRPG, RBMXP1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1181: pI=5.40; Mw=44276 Cross-references UniProtKB/Swiss-Prot P38159; RBMX_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RBMX_HUMAN Primary accession number P38159 Secondary accession number(s) B4E3U4 D3DWH0 E9PG86 Q5JQ67 Q8N8Y7 Q969R3 Sequence was last modified on  September 19, 2002 (version 3) Annotations were last modified on  March 15, 2017 (version 191) Name and origin of the protein Description RecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Glycoprotein p43; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G; Contains: RecName: Full=RNA-binding motif protein, X chromosome, N-terminally processed; Gene name Name=RBMX Synonyms=HNRPG, RBMXP1 Encoded on Name=RBMX; Synonyms=HNRPG, RBMXP1 Keywords 3D-structure; Acetylation; Activator; Alternative splicing; Complete proteome; Direct protein sequencing; Glycoprotein; Isopeptide bond; Mental retardation; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repressor; Ribonucleoprotein; RNA-binding; Spliceosome; Transcription; Tumor suppressor; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Z23064; CAA80599.1; -; mRNA EMBL AF266723; AAK58567.1; -; Genomic_DNA EMBL AF266720; AAK58567.1; JOINED; Genomic_DNA EMBL AF266721; AAK58567.1; JOINED; Genomic_DNA EMBL AF266722; AAK58567.1; JOINED; Genomic_DNA EMBL AY464692; AAR28036.1; -; mRNA EMBL AK096015; BAC04674.1; -; mRNA EMBL AK304868; BAG65606.1; -; mRNA EMBL AL683813; CAI39448.1; -; Genomic_DNA EMBL CH471150; EAW88453.1; -; Genomic_DNA EMBL CH471150; EAW88454.1; -; Genomic_DNA EMBL CH471150; EAW88455.1; -; Genomic_DNA EMBL CH471150; EAW88457.1; -; Genomic_DNA EMBL BC006550; AAH06550.1; -; mRNA EMBL BC007435; AAH07435.1; -; mRNA CCDS CCDS14661.1; -. [P38159-1]; . CCDS CCDS55510.1; -. [P38159-3]; . RefSeq NP_001158275.1; NM_001164803.1. [P38159-3]; . RefSeq NP_002130.2; NM_002139.3. [P38159-1]; . UniGene Hs.380118; -; . UniGene Hs.710162; -; . PDB 2MB0; NMR; -; B=1-95 PDB 2MKS; NMR; -; A=1-90 PDBsum 2MB0; -; . PDBsum 2MKS; -; . ProteinModelPortal P38159; -; . SMR P38159; -; . BioGrid 118134; 155; . DIP DIP-34447N; -; . IntAct P38159; 95; . MINT MINT-5000999; -; . STRING 9606.ENSP00000359645; -; . iPTMnet P38159; -; . PhosphoSitePlus P38159; -; . SwissPalm P38159; -; . BioMuta RBMX; -; . DMDM 23503093; -; . SWISS-2DPAGE P38159; -; . EPD P38159; -; . MaxQB P38159; -; . PaxDb P38159; -; . PeptideAtlas P38159; -; . PRIDE P38159; -; . TopDownProteomics P38159-1; -. [P38159-1]; . DNASU 27316; -; . Ensembl ENST00000320676; ENSP00000359645; ENSG00000147274. [P38159-1]; . Ensembl ENST00000431446; ENSP00000411989; ENSG00000147274. [P38159-3]; . GeneID 27316; -; . KEGG hsa:27316; -; . UCSC uc004fae.4; human. [P38159-1]; . CTD 27316; -; . DisGeNET 27316; -; . GeneCards RBMX; -; . HGNC HGNC:9910; RBMX; . HPA HPA057707; -; . MIM 300199; gene; . MIM 300238; phenotype; . neXtProt NX_P38159; -; . OpenTargets ENSG00000147274; -; . PharmGKB PA34277; -; . eggNOG ENOG410IHG3; Eukaryota; . eggNOG ENOG4111GI6; LUCA; . GeneTree ENSGT00710000106295; -; . HOGENOM HOG000276235; -; . HOVERGEN HBG063314; -; . InParanoid P38159; -; . KO K12885; -; . OMA RDYSYRE; -; . OrthoDB EOG091G13K0; -; . PhylomeDB P38159; -; . TreeFam TF331833; -; . Reactome R-HSA-72163; mRNA Splicing - Major Pathway; . Reactome R-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; . ChiTaRS RBMX; human; . GeneWiki RBMX; -; . GenomeRNAi 27316; -; . PRO PR:P38159; -; . Proteomes UP000005640; Chromosome X; . Bgee ENSG00000147274; -; . CleanEx HS_RBMX; -; . ExpressionAtlas P38159; baseline and differential; . Genevisible P38159; HS; . GO GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005615; C:extracellular space; IDA:UniProtKB; . GO GO:0030529; C:intracellular ribonucleoprotein complex; NAS:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005719; C:nuclear euchromatin; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0044530; C:supraspliceosomal complex; IDA:UniProtKB; . GO GO:0003682; F:chromatin binding; IDA:UniProtKB; . GO GO:0001047; F:core promoter binding; IDA:UniProtKB; . GO GO:0042802; F:identical protein binding; IPI:IntAct; . GO GO:0003729; F:mRNA binding; IDA:UniProtKB; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0071347; P:cellular response to interleukin-1; IDA:UniProtKB; . GO GO:0010467; P:gene expression; TAS:Reactome; . GO GO:0006509; P:membrane protein ectodomain proteolysis; IDA:UniProtKB; . GO GO:0000398; P:mRNA splicing; via spliceosome; IC:UniProtKB GO GO:0048025; P:negative regulation of mRNA splicing; via spliceosome; ISS:UniProtKB GO GO:0001649; P:osteoblast differentiation; IDA:UniProtKB; . GO GO:0048026; P:positive regulation of mRNA splicing; via spliceosome; ISS:UniProtKB GO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB; . GO GO:0051260; P:protein homooligomerization; ISS:UniProtKB; . GO GO:0000381; P:regulation of alternative mRNA splicing; via spliceosome; IDA:UniProtKB GO GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB; . Gene3D 3.30.70.330; -; 1; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR012604; RBM1CTR; . InterPro IPR000504; RRM_dom; . InterPro IPR003954; RRM_dom_euk; . Pfam PF08081; RBM1CTR; 1; . Pfam PF00076; RRM_1; 1; . SMART SM00360; RRM; 1; . SMART SM00361; RRM_1; 1; . SUPFAM SSF54928; SSF54928; 1; . PROSITE PS50102; RRM; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

[Home]